STRuster

 STRuster results: 54890

 SCOP 1.71 classification
Class: Alpha and beta proteins (a+b)
Fold: Ferredoxin-like
Superfamily: 4Fe-4S ferredoxins
Family: Ferredoxin domains from multidomain proteins
Protein: Pyruvate-ferredoxin oxidoreductase, PFOR, domain V
Species: Desulfovibrio africanus
Species SCOP sunid: 54890

 Set description
Number of entries: 6
SCOP Entries: d1keka5 d1b0pa5 d1b0pb5 d2pdaa5 d1kekb5 d2pdab5
Alignment File: 54890.alig
Aligned Sequences: 54890_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 54890_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(40, 65), (88, 90), (112, 116)]
Uniprot Nr [(709, 734), (757, 759), (781, 785)]

 Invariant Regions
Region1
Alignment Nr[(0, 39), (66, 87), (91, 111)]
Uniprot Nr[(669, 708), (735, 756), (760, 780)]
Superposition54890_superp_1.pdb.gz
Rasmol Script54890_superp_1.rsm
View in Jmol