STRuster

 STRuster results: 54683

 SCOP 1.71 classification
Class: Alpha and beta proteins (a+b)
Fold: alpha/beta-Hammerhead
Superfamily: Pyrimidine nucleoside phosphorylase C-terminal domain
Family: Pyrimidine nucleoside phosphorylase C-terminal domain
Protein: Thymidine phosphorylase
Species: Escherichia coli
Species SCOP sunid: 54683

 Set description
Number of entries: 4
SCOP Entries: d1otp_3 d1azya3 d2tpt_3 d1azyb3
Alignment File: 54683.alig
Aligned Sequences: 54683_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 54683_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 12), (26, 40), (57, 89), (103, 104)]
Uniprot Nr [(336, 348), (362, 376), (393, 425), (439, 440)]

 Invariant Regions
Region1
Alignment Nr[(13, 25), (41, 56), (90, 102)]
Uniprot Nr[(349, 361), (377, 392), (426, 438)]
Superposition54683_superp_1.pdb.gz
Rasmol Script54683_superp_1.rsm
View in Jmol