STRuster

 STRuster results: 54589

 SCOP 1.71 classification
Class: Alpha and beta proteins (a+b)
Fold: Cdc48 domain 2-like
Superfamily: Cdc48 domain 2-like
Family: Cdc48 domain 2-like
Protein: C-terminal domain of NSF-N, NSF-Nc
Species: Baker's yeast (Saccharomyces cerevisiae), sec18p
Species SCOP sunid: 54589

 Set description
Number of entries: 3
SCOP Entries: d1cr5b2 d1cr5a2 d1cr5c2
Alignment File: 54589.alig
Aligned Sequences: 54589_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 54589_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 3), (70, 77), (99, 102)]
Uniprot Nr [(108, 111), (178, 185), (207, 210)]

 Invariant Regions
Region1
Alignment Nr[(4, 69), (78, 98)]
Uniprot Nr[(112, 177), (186, 206)]
Superposition54589_superp_1.pdb.gz
Rasmol Script54589_superp_1.rsm
View in Jmol