STRuster

 STRuster results: 54588

 SCOP 1.71 classification
Class: Alpha and beta proteins (a+b)
Fold: Cdc48 domain 2-like
Superfamily: Cdc48 domain 2-like
Family: Cdc48 domain 2-like
Protein: C-terminal domain of NSF-N, NSF-Nc
Species: Hamster (Cricetulus griseus)
Species SCOP sunid: 54588

 Set description
Number of entries: 4
SCOP Entries: d1qdna2 d1qcsa2 d1qdnc2 d1qdnb2
Alignment File: 54588.alig
Aligned Sequences: 54588_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 54588_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 1), (73, 73)]
Uniprot Nr [(86, 87), (156, 156)]

 Invariant Regions
Region1
Alignment Nr[(2, 72), (74, 118)]
Uniprot Nr[(88, 155), (157, 201)]
Superposition54588_superp_1.pdb.gz
Rasmol Script54588_superp_1.rsm
View in Jmol