| STRuster results: 54485 |
| SCOP 1.71 classification |
| Class: | Alpha and beta proteins (a+b) |
| Fold: | MHC antigen-recognition domain |
| Superfamily: | MHC antigen-recognition domain |
| Family: | MHC antigen-recognition domain |
| Protein: | Class I MHC, alpha-1 and alpha-2 domains |
| Species: | Mouse (Mus musculus), H-2DD |
| Species SCOP sunid: | 54485 |
| Set description |
| Number of entries: | 3 |
| SCOP Entries: | d1biia2 d1ddha2 d1qo3a2 |
| Alignment File: | 54485.alig |
| Aligned Sequences: | 54485_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 54485_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(0, 0), (14, 17), (28, 60), (81, 90), (103, 180)] |
| Uniprot Nr | [(25, 25), (39, 42), (53, 85), (106, 115), (128, 205)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(1, 13), (18, 27), (61, 80), (91, 102)] |
| Uniprot Nr | [(26, 38), (43, 52), (86, 105), (116, 127)] |
| Superposition | 54485_superp_1.pdb.gz |
| Rasmol Script | 54485_superp_1.rsm |
| View in Jmol | |
