| STRuster results: 54481 |
| SCOP 1.71 classification |
| Class: | Alpha and beta proteins (a+b) |
| Fold: | MHC antigen-recognition domain |
| Superfamily: | MHC antigen-recognition domain |
| Family: | MHC antigen-recognition domain |
| Protein: | Class I MHC, alpha-1 and alpha-2 domains |
| Species: | Mouse (Mus musculus), H-2KB |
| Species SCOP sunid: | 54481 |
| Set description |
| Number of entries: | 48 |
| SCOP Entries: | d1kj2h2 d1mwai2 d1fzma2 d1s7td2 d1rk1a2 d1t0na2 d1g6ri2 d2ckbh2 d1rjzd2 d1fzoa2 d1s7qa2 d1t0nd2 d1rjza2 d1lk2a2 d1p4la2 d1s7ra2 d1p1za2 d1g7pa2 d1mwah2 d1fo0h2 d1osza2 d1kbgh2 d1fzka2 d1g7qa2 d1kpua2 d1kpva2 d1s7rd2 d1n59c2 d1g6rh2 d1bqhd2 d1nanh2 d1rk0a2 d1t0ma2 d1kj2i2 d1lega2 d1leka2 d1kj3i2 d1bqha2 d1kj3h2 d1s7ta2 d1rjyd2 d1s7sa2 d2ckbi2 d1namh2 d1n59a2 d1rjya2 d1fzja2 d1t0md2 |
| Alignment File: | 54481.alig |
| Aligned Sequences: | 54481_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 54481_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(30, 42), (178, 183)] |
| Uniprot Nr | [(50, 62), (197, 202)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(0, 29), (43, 177)] |
| Uniprot Nr | [(21, 49), (63, 196)] |
| Superposition | 54481_superp_1.pdb.gz |
| Rasmol Script | 54481_superp_1.rsm |
| View in Jmol | |
