STRuster

 STRuster results: 54478

 SCOP 1.71 classification
Class: Alpha and beta proteins (a+b)
Fold: MHC antigen-recognition domain
Superfamily: MHC antigen-recognition domain
Family: MHC antigen-recognition domain
Protein: Class I MHC, alpha-1 and alpha-2 domains
Species: Human (Homo sapiens), HLA-CW4
Species SCOP sunid: 54478

 Set description
Number of entries: 3
SCOP Entries: d1im9e2 d1qqda2 d1im9a2
Alignment File: 54478.alig
Aligned Sequences: 54478_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 54478_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(148, 149)]
Uniprot Nr [(173, 174)]

 Invariant Regions
Region1
Alignment Nr[(0, 147), (150, 180)]
Uniprot Nr[(25, 172), (175, 205)]
Superposition54478_superp_1.pdb.gz
Rasmol Script54478_superp_1.rsm
View in Jmol