STRuster

 STRuster results: 54268

 SCOP 1.71 classification
Class: Alpha and beta proteins (a+b)
Fold: beta-Grasp (ubiquitin-like)
Superfamily: Ubiquitin-like
Family: Ras-binding domain, RBD
Protein: Ral guanosine-nucleotide exchange factor, RalGDS
Species: Rat (Rattus norvegicus)
Species SCOP sunid: 54268

 Set description
Number of entries: 4
SCOP Entries: d1lfdc_ d1lxdb_ d1lxda_ d1lfda_
Alignment File: 54268.alig
Aligned Sequences: 54268_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 54268_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 16), (41, 44)]
Uniprot Nr [(778, 794), (819, 822)]

 Invariant Regions
Region1
Alignment Nr[(17, 40), (45, 86)]
Uniprot Nr[(795, 818), (823, 864)]
Superposition54268_superp_1.pdb.gz
Rasmol Script54268_superp_1.rsm
View in Jmol