STRuster

 STRuster results: 54149

 SCOP 1.71 classification
Class: Alpha and beta proteins (a+b)
Fold: IL8-like
Superfamily: Interleukin 8-like chemokines
Family: Interleukin 8-like chemokines
Protein: Platelet basic protein, PBP
Species: Human (Homo sapiens)
Species SCOP sunid: 54149

 Set description
Number of entries: 5
SCOP Entries: d1f9pa_ d1tvxa_ d1tvxc_ d1tvxd_ d1tvxb_
Alignment File: 54149.alig
Aligned Sequences: 54149_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 54149_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 26), (43, 44), (79, 80)]
Uniprot Nr [(44, 70), (87, 88), (123, 124)]

 Invariant Regions
Region1
Alignment Nr[(27, 42), (45, 78)]
Uniprot Nr[(71, 86), (89, 122)]
Superposition54149_superp_1.pdb.gz
Rasmol Script54149_superp_1.rsm
View in Jmol