STRuster

 STRuster results: 54135

 SCOP 1.71 classification
Class: Alpha and beta proteins (a+b)
Fold: IL8-like
Superfamily: Interleukin 8-like chemokines
Family: Interleukin 8-like chemokines
Protein: Monocyte chemoattractant protein-1 (MCP-1, MCAF)
Species: Human (Homo sapiens)
Species SCOP sunid: 54135

 Set description
Number of entries: 4
SCOP Entries: d1ml0d_ d1doka_ d1dokb_ d1dol__
Alignment File: 54135.alig
Aligned Sequences: 54135_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 54135_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 8), (69, 71)]
Uniprot Nr [(23, 31), (92, 94)]

 Invariant Regions
Region1
Alignment Nr[(9, 68)]
Uniprot Nr[(32, 91)]
Superposition54135_superp_1.pdb.gz
Rasmol Script54135_superp_1.rsm
View in Jmol