STRuster

 STRuster results: 54133

 SCOP 1.71 classification
Class: Alpha and beta proteins (a+b)
Fold: IL8-like
Superfamily: Interleukin 8-like chemokines
Family: Interleukin 8-like chemokines
Protein: RANTES (regulated upon activation, normal T-cell expressed and secreted)
Species: Human (Homo sapiens)
Species SCOP sunid: 54133

 Set description
Number of entries: 14
SCOP Entries: d1u4mb_ d1u4pb_ d1eqtb_ d1u4ma_ d1u4rd_ d1u4ra_ d1u4rc_ d1u4la_ d1eqta_ d1u4lb_ d1b3ab_ d1b3aa_ d1u4pa_ d1u4rb_
Alignment File: 54133.alig
Aligned Sequences: 54133_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 54133_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 4), (65, 67)]
Uniprot Nr [(24, 28), (89, 91)]

 Invariant Regions
Region1
Alignment Nr[(5, 64)]
Uniprot Nr[(29, 88)]
Superposition54133_superp_1.pdb.gz
Rasmol Script54133_superp_1.rsm
View in Jmol