| STRuster results: 54071 |
| SCOP 1.71 classification |
| Class: | Alpha and beta proteins (a+b) |
| Fold: | His-Me finger endonucleases |
| Superfamily: | His-Me finger endonucleases |
| Family: | Intron-encoded homing endonucleases |
| Protein: | Intron-encoded homing endonuclease I-PpoI |
| Species: | Slime mold (Physarum polycephalum) |
| Species SCOP sunid: | 54071 |
| Set description |
| Number of entries: | 16 |
| SCOP Entries: | d1a74b_ d1evwa_ d1evxa_ d1a74a_ d1evwd_ d1a73a_ d1evwc_ d1a73b_ d1evxb_ d1cz0a_ d1cyqa_ d1ippa_ d1cz0b_ d1cyqb_ d1ippb_ d1evwb_ |
| Alignment File: | 54071.alig |
| Aligned Sequences: | 54071_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 54071_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(0, 0), (87, 88), (156, 161)] |
| Uniprot Nr | [(2, 2), (89, 90), (158, 163)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(1, 86), (89, 155)] |
| Uniprot Nr | [(3, 88), (91, 157)] |
| Superposition | 54071_superp_1.pdb.gz |
| Rasmol Script | 54071_superp_1.rsm |
| View in Jmol | |
