STRuster

 STRuster results: 54065

 SCOP 1.71 classification
Class: Alpha and beta proteins (a+b)
Fold: His-Me finger endonucleases
Superfamily: His-Me finger endonucleases
Family: HNH-motif
Protein: DNase domain of colicin E9
Species: Escherichia coli
Species SCOP sunid: 54065

 Set description
Number of entries: 16
SCOP Entries: d1bxib_ d1fsjb_ d1v15b_ d1emvb_ d1v13b_ d1v14c_ d1v15d_ d1v14d_ d1fsje_ d1v15c_ d1v14a_ d1fr2b_ d1v14b_ d1fsjc_ d1v13a_ d1fsjd_
Alignment File: 54065.alig
Aligned Sequences: 54065_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 54065_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 2), (106, 113), (133, 135)]
Uniprot Nr [(449, 450), (554, 561), (580, 582)]

 Invariant Regions
Region1
Alignment Nr[(3, 105), (114, 132)]
Uniprot Nr[(451, 553), (562, 579)]
Superposition54065_superp_1.pdb.gz
Rasmol Script54065_superp_1.rsm
View in Jmol