STRuster

 STRuster results: 54029

 SCOP 1.71 classification
Class: Alpha and beta proteins (a+b)
Fold: Cysteine proteinases
Superfamily: Cysteine proteinases
Family: Papain-like
Protein: (Pro)cathepsin K
Species: Human (Homo sapiens)
Species SCOP sunid: 54029

 Set description
Number of entries: 22
SCOP Entries: d1nl6b_ d1tu6a_ d1nlja_ d1au0__ d1tu6b_ d1by8a_ d1au2__ d1ayu__ d1atk__ d7pckb_ d1ayw__ d1bgo__ d7pcka_ d1nl6a_ d7pckd_ d1snka_ d7pckc_ d1au4__ d1q6ka_ d1au3__ d1ayv__ d1nljb_
Alignment File: 54029.alig
Aligned Sequences: 54029_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 54029_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 26), (77, 100), (182, 200), (251, 252)]
Uniprot Nr [(16, 42), (93, 116), (198, 216), (267, 268)]

 Invariant Regions
Region1
Alignment Nr[(27, 76), (101, 181), (201, 250), (253, 313)]
Uniprot Nr[(43, 92), (117, 197), (217, 266), (269, 329)]
Superposition54029_superp_1.pdb.gz
Rasmol Script54029_superp_1.rsm
View in Jmol