STRuster

 STRuster results: 53980

 SCOP 1.71 classification
Class: Alpha and beta proteins (a+b)
Fold: Lysozyme-like
Superfamily: Lysozyme-like
Family: C-type lysozyme
Protein: alpha-Lactalbumin
Species: Cow (Bos taurus)
Species SCOP sunid: 53980

 Set description
Number of entries: 16
SCOP Entries: d1hfza_ d1f6rc_ d1f6sc_ d1f6rf_ d1hfzd_ d1f6se_ d1f6ra_ d1f6rd_ d1f6sb_ d1hfzb_ d1f6sd_ d1f6rb_ d1f6re_ d1f6sa_ d1hfzc_ d1f6sf_
Alignment File: 53980.alig
Aligned Sequences: 53980_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 53980_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(44, 44), (120, 123)]
Uniprot Nr [(63, 63), (139, 142)]

 Invariant Regions
Region1
Alignment Nr[(0, 43), (45, 119)]
Uniprot Nr[(19, 62), (64, 138)]
Superposition53980_superp_1.pdb.gz
Rasmol Script53980_superp_1.rsm
View in Jmol