STRuster

 STRuster results: 53945

 SCOP 1.71 classification
Class: Alpha and beta proteins (a+b)
Fold: Microbial ribonucleases
Superfamily: Microbial ribonucleases
Family: Bacterial ribonucleases
Protein: Barnase
Species: Bacillus amyloliquefaciens
Species SCOP sunid: 53945

 Set description
Number of entries: 43
SCOP Entries: d1b20c_ d1b2zc_ d1bnfa_ d1brhc_ d1b21a_ d1bngb_ d1b2ub_ d1a2pc_ d1b27b_ d1b2xc_ d1b21b_ d1brjc_ d1b2sb_ d1yvs__ d1b2za_ d1b2ua_ d1bnja_ d1bnjb_ d1bnfb_ d1b2xb_ d1brja_ d1bnga_ d1a2pb_ d1b27a_ d1bnec_ d1brjb_ d1b2sa_ d1b2zb_ d1b20a_ d1brhb_ d1b20b_ d1b2uc_ d1bnjc_ d1b27c_ d1bnea_ d1bnfc_ d1brha_ d1b21c_ d1a2pa_ d1b2sc_ d1b2xa_ d1bngc_ d1bneb_
Alignment File: 53945.alig
Aligned Sequences: 53945_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 53945_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 1), (37, 43), (65, 68), (79, 80)]
Uniprot Nr [(48, 49), (85, 91), (113, 116), (127, 128)]

 Invariant Regions
Region1
Alignment Nr[(44, 64), (69, 78), (81, 109)]
Uniprot Nr[(92, 112), (117, 126), (129, 157)]
Superposition53945_superp_1.pdb.gz
Rasmol Script53945_superp_1.rsm
View in Jmol
 
Region2
Alignment Nr[(2, 36)]
Uniprot Nr[(50, 84)]
Superposition53945_superp_2.pdb.gz
Rasmol Script53945_superp_2.rsm
View in Jmol