STRuster

 STRuster results: 53880

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: Periplasmic binding protein-like II
Superfamily: Periplasmic binding protein-like II
Family: Phosphate binding protein-like
Protein: Glutamine-binding protein
Species: Escherichia coli
Species SCOP sunid: 53880

 Set description
Number of entries: 3
SCOP Entries: d1ggga_ d1gggb_ d1wdna_
Alignment File: 53880.alig
Aligned Sequences: 53880_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 53880_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(83, 105), (153, 178), (210, 210)]
Uniprot Nr [(109, 131), (179, 204), (236, 236)]

 Invariant Regions
Region1
Alignment Nr[(0, 82), (179, 209), (211, 222)]
Uniprot Nr[(26, 108), (205, 235), (237, 248)]
Superposition53880_superp_1.pdb.gz
Rasmol Script53880_superp_1.rsm
View in Jmol
 
Region2
Alignment Nr[(106, 152)]
Uniprot Nr[(132, 178)]
Superposition53880_superp_2.pdb.gz
Rasmol Script53880_superp_2.rsm
View in Jmol