STRuster

 STRuster results: 53876

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: Periplasmic binding protein-like II
Superfamily: Periplasmic binding protein-like II
Family: Phosphate binding protein-like
Protein: Spermidine/putrescine-binding protein PotD
Species: Escherichia coli
Species SCOP sunid: 53876

 Set description
Number of entries: 5
SCOP Entries: d1poy1_ d1poy4_ d1poy3_ d1pot__ d1poy2_
Alignment File: 53876.alig
Aligned Sequences: 53876_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 53876_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(320, 322)]
Uniprot Nr [(346, 348)]

 Invariant Regions
Region1
Alignment Nr[(0, 319)]
Uniprot Nr[(26, 345)]
Superposition53876_superp_1.pdb.gz
Rasmol Script53876_superp_1.rsm
View in Jmol