| STRuster results: 53871 |
| SCOP 1.71 classification |
| Class: | Alpha and beta proteins (a/b) |
| Fold: | Periplasmic binding protein-like II |
| Superfamily: | Periplasmic binding protein-like II |
| Family: | Phosphate binding protein-like |
| Protein: | Dipeptide-binding protein |
| Species: | Escherichia coli |
| Species SCOP sunid: | 53871 |
| Set description |
| Number of entries: | 5 |
| SCOP Entries: | d1dppc_ d1dpe__ d1dppg_ d1dppa_ d1dppe_ |
| Alignment File: | 53871.alig |
| Aligned Sequences: | 53871_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 53871_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(0, 0), (40, 51), (74, 80), (165, 169), (191, 207), (243, 262), (298, 310), (406, 412), (426, 427), (443, 449), (475, 476), (494, 506)] |
| Uniprot Nr | [(29, 29), (69, 80), (103, 109), (194, 198), (220, 236), (272, 291), (327, 339), (435, 441), (455, 456), (472, 478), (504, 505), (523, 535)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(1, 39), (52, 73), (81, 164), (170, 190), (208, 242), (477, 493)] |
| Uniprot Nr | [(30, 68), (81, 102), (110, 193), (199, 219), (237, 271), (506, 522)] |
| Superposition | 53871_superp_1.pdb.gz |
| Rasmol Script | 53871_superp_1.rsm |
| View in Jmol | |
| Region | 2 |
| Alignment Nr | [(263, 297), (311, 405), (413, 425), (428, 442), (450, 474)] |
| Uniprot Nr | [(292, 326), (340, 434), (442, 454), (457, 471), (479, 503)] |
| Superposition | 53871_superp_2.pdb.gz |
| Rasmol Script | 53871_superp_2.rsm |
| View in Jmol | |
