STRuster

 STRuster results: 53868

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: Periplasmic binding protein-like II
Superfamily: Periplasmic binding protein-like II
Family: Phosphate binding protein-like
Protein: Ferric-binding protein FbpA
Species: Haemophilus influenzae
Species SCOP sunid: 53868

 Set description
Number of entries: 5
SCOP Entries: d1nnfa_ d1qw0a_ d1qvsa_ d1d9va_ d1mrp__
Alignment File: 53868.alig
Aligned Sequences: 53868_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 53868_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(143, 146), (191, 202), (216, 217), (276, 283), (307, 308)]
Uniprot Nr [(167, 170), (215, 226), (240, 241), (300, 307), (331, 332)]

 Invariant Regions
Region1
Alignment Nr[(147, 190), (203, 215), (284, 306)]
Uniprot Nr[(171, 214), (227, 239), (308, 330)]
Superposition53868_superp_1.pdb.gz
Rasmol Script53868_superp_1.rsm
View in Jmol
 
Region2
Alignment Nr[(203, 215), (218, 275)]
Uniprot Nr[(227, 239), (242, 299)]
Superposition53868_superp_2.pdb.gz
Rasmol Script53868_superp_2.rsm
View in Jmol