STRuster

 STRuster results: 53866

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: Periplasmic binding protein-like II
Superfamily: Periplasmic binding protein-like II
Family: Phosphate binding protein-like
Protein: Thiaminase I
Species: Paenibacillus thiaminolyticus
Species SCOP sunid: 53866

 Set description
Number of entries: 4
SCOP Entries: d3thia_ d4thia_ d2thib_ d2thia_
Alignment File: 53866.alig
Aligned Sequences: 53866_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 53866_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(252, 255)]
Uniprot Nr [(291, 294)]

 Invariant Regions
Region1
Alignment Nr[(0, 251), (256, 361)]
Uniprot Nr[(39, 290), (295, 400)]
Superposition53866_superp_1.pdb.gz
Rasmol Script53866_superp_1.rsm
View in Jmol