STRuster

 STRuster results: 53853

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: Periplasmic binding protein-like II
Superfamily: Periplasmic binding protein-like II
Family: Phosphate binding protein-like
Protein: Oligo-peptide binding protein (OPPA)
Species: Salmonella typhimurium
Species SCOP sunid: 53853

 Set description
Number of entries: 32
SCOP Entries: d1b4za_ d1b46a_ d1b32a_ d1rkm__ d1b1ha_ d1b3ha_ d1b51a_ d1jeta_ d1b0ha_ d1b3la_ d1b5ia_ d1b4ha_ d1b6ha_ d1b5ja_ d1b2ha_ d1olca_ d1b7ha_ d1b3fa_ d1b58a_ d1b05a_ d1b40a_ d1b3lc_ d1jeva_ d1b5ha_ d1jeua_ d1qkba_ d2olba_ d1b9ja_ d1b3ga_ d2rkma_ d1qkaa_ d1b52a_
Alignment File: 53853.alig
Aligned Sequences: 53853_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 53853_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Invariant Regions
Region1
Alignment Nr[(0, 516)]
Uniprot Nr[(27, 543)]
Superposition53853_superp_1.pdb.gz
Rasmol Script53853_superp_1.rsm
View in Jmol