STRuster

 STRuster results: 53844

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: Periplasmic binding protein-like I
Superfamily: Periplasmic binding protein-like I
Family: L-arabinose binding protein-like
Protein: Leucine-binding protein
Species: Escherichia coli
Species SCOP sunid: 53844

 Set description
Number of entries: 7
SCOP Entries: d1usga_ d1usic_ d1uskc_ d1usia_ d1uska_ d1uskb_ d1uskd_
Alignment File: 53844.alig
Aligned Sequences: 53844_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 53844_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(99, 100), (117, 133), (251, 253), (324, 344)]
Uniprot Nr [(123, 124), (141, 157), (275, 277), (348, 368)]

 Invariant Regions
Region1
Alignment Nr[(0, 98), (101, 116), (254, 323)]
Uniprot Nr[(24, 122), (125, 140), (278, 347)]
Superposition53844_superp_1.pdb.gz
Rasmol Script53844_superp_1.rsm
View in Jmol
 
Region2
Alignment Nr[(134, 250)]
Uniprot Nr[(158, 274)]
Superposition53844_superp_2.pdb.gz
Rasmol Script53844_superp_2.rsm
View in Jmol