STRuster

 STRuster results: 53834

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: Periplasmic binding protein-like I
Superfamily: Periplasmic binding protein-like I
Family: L-arabinose binding protein-like
Protein: Amide receptor/negative regulator of the amidase operon (AmiC)
Species: Pseudomonas aeruginosa
Species SCOP sunid: 53834

 Set description
Number of entries: 4
SCOP Entries: d1pea__ d1qnla_ d1qo0b_ d1qo0a_
Alignment File: 53834.alig
Aligned Sequences: 53834_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 53834_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(33, 36), (132, 134), (155, 159), (214, 225), (359, 373)]
Uniprot Nr [(39, 42), (138, 140), (161, 165), (220, 231), (365, 379)]

 Invariant Regions
Region1
Alignment Nr[(0, 32), (37, 131), (135, 154), (160, 213), (226, 358)]
Uniprot Nr[(6, 38), (43, 137), (141, 160), (166, 219), (232, 364)]
Superposition53834_superp_1.pdb.gz
Rasmol Script53834_superp_1.rsm
View in Jmol