STRuster

 STRuster results: 53772

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: UDP-Glycosyltransferase/glycogen phosphorylase
Superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
Family: Oligosaccharide phosphorylase
Protein: Maltodextrin phosphorylase (MALP)
Species: Escherichia coli
Species SCOP sunid: 53772

 Set description
Number of entries: 14
SCOP Entries: d1ahpa_ d1l6ia_ d1l5wb_ d1qm5b_ d1l5wa_ d2ecpa_ d1e4oa_ d1ahpb_ d2ecpb_ d1qm5a_ d1l6ib_ d1l5va_ d1e4ob_ d1l5vb_
Alignment File: 53772.alig
Aligned Sequences: 53772_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 53772_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 2), (48, 57), (186, 188), (344, 350), (389, 390), (423, 423), (556, 561), (600, 601), (794, 795)]
Uniprot Nr [(1, 3), (49, 58), (187, 189), (345, 351), (390, 391), (424, 424), (557, 562), (601, 602), (795, 796)]

 Invariant Regions
Region1
Alignment Nr[(3, 47), (58, 185), (189, 343), (391, 422), (424, 555), (562, 599), (602, 793)]
Uniprot Nr[(4, 48), (59, 186), (190, 344), (392, 423), (425, 556), (563, 600), (603, 794)]
Superposition53772_superp_1.pdb.gz
Rasmol Script53772_superp_1.rsm
View in Jmol
 
Region2
Alignment Nr[(3, 47), (58, 185), (189, 343), (351, 388), (391, 422), (424, 555)]
Uniprot Nr[(4, 48), (59, 186), (190, 344), (352, 389), (392, 423), (425, 556)]
Superposition53772_superp_2.pdb.gz
Rasmol Script53772_superp_2.rsm
View in Jmol