STRuster

 STRuster results: 53454

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: Nucleotide-diphospho-sugar transferases
Superfamily: Nucleotide-diphospho-sugar transferases
Family: beta 1,4 galactosyltransferase (b4GalT1)
Protein: beta 1,4 galactosyltransferase (b4GalT1)
Species: Cow (Bos taurus)
Species SCOP sunid: 53454

 Set description
Number of entries: 27
SCOP Entries: d1oqmd_ d1nqid_ d1nwgb_ d1nmmb_ d1pzta_ d1nf5b_ d1oqmb_ d1nkhd_ d1o23d_ d1nmmd_ d1nwgd_ d1nheb_ d1pzyb_ d1tw1b_ d1pzyd_ d1o23b_ d1tvyb_ d1tw1a_ d1o0rb_ d1nhed_ d1nf5d_ d1tw5b_ d1tw5a_ d1o0ra_ d1nqib_ d1tvya_ d1nkhb_
Alignment File: 53454.alig
Aligned Sequences: 53454_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 53454_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(224, 236), (280, 281)]
Uniprot Nr [(347, 359), (401, 402)]

 Invariant Regions
Region1
Alignment Nr[(0, 223), (237, 279)]
Uniprot Nr[(130, 346), (360, 400)]
Superposition53454_superp_1.pdb.gz
Rasmol Script53454_superp_1.rsm
View in Jmol