STRuster

 STRuster results: 53430

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: PLP-dependent transferases
Superfamily: PLP-dependent transferases
Family: GABA-aminotransferase-like
Protein: Serine hydroxymethyltransferase
Species: Rabbit (Oryctolagus cuniculus)
Species SCOP sunid: 53430

 Set description
Number of entries: 14
SCOP Entries: d1ls3a_ d1rvub_ d1rv4b_ d1rv4a_ d1cj0a_ d1ls3b_ d1cj0b_ d1rv3b_ d1ls3c_ d1rvua_ d1rvyb_ d1ls3d_ d1rvya_ d1rv3a_
Alignment File: 53430.alig
Aligned Sequences: 53430_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 53430_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 4), (447, 453), (494, 513), (541, 542)]
Uniprot Nr [(14, 18), (389, 395), (436, 455), (483, 483)]

 Invariant Regions
Region1
Alignment Nr[(454, 493), (514, 540)]
Uniprot Nr[(396, 435), (456, 482)]
Superposition53430_superp_1.pdb.gz
Rasmol Script53430_superp_1.rsm
View in Jmol