STRuster

 STRuster results: 53407

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: PLP-dependent transferases
Superfamily: PLP-dependent transferases
Family: Cystathionine synthase-like
Protein: Cystathionine gamma-synthase, CGS
Species: Common tobacco (Nicotiana tabacum)
Species SCOP sunid: 53407

 Set description
Number of entries: 44
SCOP Entries: d1i41j_ d1i48c_ d1i43h_ d1i48k_ d1i41a_ d1qgng_ d1i41i_ d1i43k_ d1i43c_ d1qgnb_ d1i41d_ d1i41l_ d1i41k_ d1i48a_ d1i48i_ d1i41c_ d1i43f_ d1qgne_ d1i43g_ d1i48b_ d1i43i_ d1i48j_ d1i43a_ d1qgnh_ d1i48g_ d1i43l_ d1qgnc_ d1i41e_ d1i43d_ d1i48h_ d1qgnf_ d1i41h_ d1i48l_ d1i48e_ d1i43j_ d1i43b_ d1qgna_ d1i41g_ d1i48d_ d1i48f_ d1i41f_ d1i41b_ d1i43e_ d1qgnd_
Alignment File: 53407.alig
Aligned Sequences: 53407_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 53407_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 4), (51, 56), (113, 115), (148, 152), (359, 366), (394, 397)]
Uniprot Nr [(48, 52), (99, 104), (161, 163), (196, 200), (407, 414), (442, 445)]

 Invariant Regions
Region1
Alignment Nr[(5, 50), (57, 112), (116, 147), (153, 358), (367, 393)]
Uniprot Nr[(53, 98), (105, 160), (164, 195), (201, 406), (415, 441)]
Superposition53407_superp_1.pdb.gz
Rasmol Script53407_superp_1.rsm
View in Jmol