STRuster

 STRuster results: 53362

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: S-adenosyl-L-methionine-dependent methyltransferases
Superfamily: S-adenosyl-L-methionine-dependent methyltransferases
Family: mRNA cap methylase
Protein: Polymerase regulatory subunit VP39
Species: Vaccinia virus
Species SCOP sunid: 53362

 Set description
Number of entries: 17
SCOP Entries: d1eama_ d1vp9__ d1p39__ d1jtea_ d1jsza_ d1vp3__ d1jtfa_ d3mct__ d4dcg__ d1bky__ d1av6a_ d1vpt__ d1v39__ d1b42__ d1eqa__ d2vp3__ d3mag__
Alignment File: 53362.alig
Aligned Sequences: 53362_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 53362_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(215, 215)]
Uniprot Nr [(216, 216)]

 Invariant Regions
Region1
Alignment Nr[(0, 214), (216, 296)]
Uniprot Nr[(1, 215), (217, 297)]
Superposition53362_superp_1.pdb.gz
Rasmol Script53362_superp_1.rsm
View in Jmol