STRuster

 STRuster results: 53303

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: vWA-like
Superfamily: vWA-like
Family: Integrin A (or I) domain
Protein: Integrin CD11a/CD18 (Leukocyte function associated antigen-1, LFA-1)
Species: Human (Homo sapiens)
Species SCOP sunid: 53303

 Set description
Number of entries: 20
SCOP Entries: d1zon__ d1mq9a_ d1rd4c_ d1mqaa_ d1zoob_ d1xdga_ d1cqpa_ d1zooa_ d1rd4a_ d1rd4d_ d1cqpb_ d1xdda_ d1zopb_ d1lfaa_ d1rd4b_ d1lfab_ d1xdgb_ d1zopa_ d1xddb_ d1mjna_
Alignment File: 53303.alig
Aligned Sequences: 53303_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 53303_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 1), (112, 113), (135, 143), (160, 184)]
Uniprot Nr [(152, 153), (264, 265), (287, 295), (312, 336)]

 Invariant Regions
Region1
Alignment Nr[(2, 111), (114, 134), (144, 159)]
Uniprot Nr[(154, 263), (266, 286), (296, 311)]
Superposition53303_superp_1.pdb.gz
Rasmol Script53303_superp_1.rsm
View in Jmol