STRuster

 STRuster results: 53295

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: PRTase-like
Superfamily: PRTase-like
Family: Phosphoribosyltransferases (PRTases)
Protein: Uracil PRTase, Upp
Species: Toxoplasma gondii
Species SCOP sunid: 53295

 Set description
Number of entries: 20
SCOP Entries: d1upfd_ d1jlrb_ d1jlra_ d1jlsc_ d1jlrd_ d1bd4c_ d1bd3d_ d1upfc_ d1jlsd_ d1bd3a_ d1bd3c_ d1jlsa_ d1jlrc_ d1bd4a_ d1bd3b_ d1upfb_ d1jlsb_ d1bd4d_ d1upfa_ d1bd4b_
Alignment File: 53295.alig
Aligned Sequences: 53295_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 53295_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 1), (91, 92), (128, 129)]
Uniprot Nr [(10, 11), (101, 102), (138, 139)]

 Invariant Regions
Region1
Alignment Nr[(2, 90), (93, 127), (130, 234)]
Uniprot Nr[(12, 100), (103, 137), (140, 244)]
Superposition53295_superp_1.pdb.gz
Rasmol Script53295_superp_1.rsm
View in Jmol