| STRuster results: 53121 |
| SCOP 1.71 classification |
| Class: | Alpha and beta proteins (a/b) |
| Fold: | Ribonuclease H-like motif |
| Superfamily: | Ribonuclease H-like |
| Family: | DnaQ-like 3'-5' exonuclease |
| Protein: | Exonuclease domain of prokaryotic DNA polymerase |
| Species: | Thermus aquaticus |
| Species SCOP sunid: | 53121 |
| Set description |
| Number of entries: | 11 |
| SCOP Entries: | d1bgxt3 d1qsya1 d1qtma1 d1qssa1 d1cmwa3 d5ktqa1 d1taua3 d2ktqa1 d4ktqa1 d3ktqa1 d1ktq_1 |
| Alignment File: | 53121.alig |
| Aligned Sequences: | 53121_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 53121_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(0, 11), (23, 24), (39, 40), (104, 105), (130, 132)] |
| Uniprot Nr | [(290, 301), (313, 314), (329, 330), (394, 395), (420, 422)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(12, 22), (25, 38), (41, 103), (106, 129)] |
| Uniprot Nr | [(302, 312), (315, 328), (331, 393), (396, 419)] |
| Superposition | 53121_superp_1.pdb.gz |
| Rasmol Script | 53121_superp_1.rsm |
| View in Jmol | |
