| STRuster results: 53039 |
| SCOP 1.71 classification |
| Class: | Alpha and beta proteins (a/b) |
| Fold: | Restriction endonuclease-like |
| Superfamily: | Eukaryotic RPB5 N-terminal domain |
| Family: | Eukaryotic RPB5 N-terminal domain |
| Protein: | Eukaryotic RPB5 N-terminal domain |
| Species: | Baker's yeast (Saccharomyces cerevisiae) |
| Species SCOP sunid: | 53039 |
| Set description |
| Number of entries: | 5 |
| SCOP Entries: | d1i6he1 d1i3qe1 d1dzfa1 d1i50e1 d1k83e1 |
| Alignment File: | 53039.alig |
| Aligned Sequences: | 53039_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 53039_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(0, 7), (42, 50), (64, 83), (98, 105), (120, 120)] |
| Uniprot Nr | [(1, 8), (43, 51), (65, 84), (99, 106), (121, 121)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(8, 41), (51, 63), (121, 142)] |
| Uniprot Nr | [(9, 42), (52, 64), (122, 143)] |
| Superposition | 53039_superp_1.pdb.gz |
| Rasmol Script | 53039_superp_1.rsm |
| View in Jmol | |
| Region | 2 |
| Alignment Nr | [(8, 41), (106, 119)] |
| Uniprot Nr | [(9, 42), (107, 120)] |
| Superposition | 53039_superp_2.pdb.gz |
| Rasmol Script | 53039_superp_2.rsm |
| View in Jmol | |
