STRuster

 STRuster results: 53035

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: Restriction endonuclease-like
Superfamily: tRNA-intron endonuclease catalytic domain-like
Family: tRNA-intron endonuclease catalytic domain-like
Protein: Tetrameric tRNA splicing endonuclease, C-terminal domain
Species: Archaeon Methanococcus jannaschii
Species SCOP sunid: 53035

 Set description
Number of entries: 4
SCOP Entries: d1a79c1 d1a79d1 d1a79a1 d1a79b1
Alignment File: 53035.alig
Aligned Sequences: 53035_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 53035_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(32, 39)]
Uniprot Nr [(115, 122)]

 Invariant Regions
Region1
Alignment Nr[(0, 31), (40, 96)]
Uniprot Nr[(83, 114), (123, 179)]
Superposition53035_superp_1.pdb.gz
Rasmol Script53035_superp_1.rsm
View in Jmol