STRuster

 STRuster results: 52998

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: Restriction endonuclease-like
Superfamily: Restriction endonuclease-like
Family: Restriction endonuclease PvuII
Protein: Restriction endonuclease PvuII
Species: Proteus vulgaris
Species SCOP sunid: 52998

 Set description
Number of entries: 13
SCOP Entries: d1k0za_ d1ni0a_ d3pvia_ d1ni0b_ d3pvib_ d1eyub_ d2pvia_ d2pvib_ d1eyua_ d1f0oa_ d1ni0c_ d1k0zb_ d1f0ob_
Alignment File: 52998.alig
Aligned Sequences: 52998_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 52998_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 23), (34, 36), (47, 54), (103, 106)]
Uniprot Nr [(2, 25), (36, 38), (49, 56), (105, 108)]

 Invariant Regions
Region1
Alignment Nr[(37, 46), (55, 102), (107, 157)]
Uniprot Nr[(39, 48), (57, 104), (109, 157)]
Superposition52998_superp_1.pdb.gz
Rasmol Script52998_superp_1.rsm
View in Jmol
 
Region2
Alignment Nr[(24, 33), (37, 46)]
Uniprot Nr[(26, 35), (39, 48)]
Superposition52998_superp_2.pdb.gz
Rasmol Script52998_superp_2.rsm
View in Jmol