STRuster

 STRuster results: 52723

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: P-loop containing nucleoside triphosphate hydrolases
Superfamily: P-loop containing nucleoside triphosphate hydrolases
Family: Extended AAA-ATPase domain
Protein: HslU
Species: Haemophilus influenzae
Species SCOP sunid: 52723

 Set description
Number of entries: 32
SCOP Entries: d1g3ic_ d1g3is_ d1kyiw_ d1im2a_ d1kyix_ d1ofib_ d1g3ix_ d1kyie_ d1ofia_ d1kyiu_ d1g3ib_ d1kyif_ d1ofhc_ d1kyiv_ d1kyic_ d1ofic_ d1kyis_ d1g3id_ d1kyid_ d1ofha_ d1g3iw_ d1g3it_ d1g3ie_ d1kyit_ d1g3ia_ d1g3iu_ d1kyia_ d1ofhb_ d1kyib_ d1g3if_ d1g41a_ d1g3iv_
Alignment File: 52723.alig
Aligned Sequences: 52723_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 52723_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 3), (18, 19), (32, 55), (71, 96), (107, 114), (243, 248), (265, 276), (298, 300), (362, 376), (403, 438)]
Uniprot Nr [(2, 4), (19, 20), (33, 54), (70, 95), (106, 112), (241, 246), (263, 274), (296, 297), (359, 372), (399, 431)]

 Invariant Regions
Region1
Alignment Nr[(4, 17), (20, 31), (56, 70), (97, 106), (249, 264), (277, 297), (301, 361), (377, 402)]
Uniprot Nr[(5, 18), (21, 32), (55, 69), (96, 105), (247, 262), (275, 295), (298, 358), (373, 398)]
Superposition52723_superp_1.pdb.gz
Rasmol Script52723_superp_1.rsm
View in Jmol