| STRuster results: 52705 |
| SCOP 1.71 classification |
| Class: | Alpha and beta proteins (a/b) |
| Fold: | P-loop containing nucleoside triphosphate hydrolases |
| Superfamily: | P-loop containing nucleoside triphosphate hydrolases |
| Family: | Tandem AAA-ATPase domain |
| Protein: | Putative DEAD box RNA helicase |
| Species: | Archaeon Methanococcus jannaschii |
| Species SCOP sunid: | 52705 |
| Set description |
| Number of entries: | 4 |
| SCOP Entries: | d1hv8a1 d1hv8a2 d1hv8b1 d1hv8b2 |
| Alignment File: | 52705.alig |
| Aligned Sequences: | 52705_alig.fasta |
| Hierarchical clustering |
| Dissimilary matrix: | 52705_dissim_matrix.txt |
| Atom Distance Standard Deviation Plots |
| S matrix: Distance Standard Deviation |
| Higher resolution plot |
| S matrix |
| T matirx: Total Standard Deviation |
| Higher resolution plot |
| T matrix |
| R matrix: Relative Distance Standard Deviation |
| Higher resolution plot |
| R matrix |
| Hinges and Invariant Regions (T) |
| Hinges |
| Alignment Nr | [(0, 2), (17, 26), (71, 72), (136, 139), (177, 179), (211, 218), (267, 291), (304, 355), (371, 372)] |
| Uniprot Nr | [(3, 5), (19, 28), (72, 73), (137, 140), (176, 178), (208, 215), (263, 287), (299, 349), (364, 365)] |
| Invariant Regions |
| Region | 1 |
| Alignment Nr | [(3, 16), (27, 70), (73, 135), (140, 176), (180, 210), (219, 266), (292, 303), (356, 370)] |
| Uniprot Nr | [(5, 18), (29, 71), (74, 136), (141, 175), (179, 207), (216, 262), (288, 298), (350, 363)] |
| Superposition | - |
