STRuster

 STRuster results: 52699

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: P-loop containing nucleoside triphosphate hydrolases
Superfamily: P-loop containing nucleoside triphosphate hydrolases
Family: ABC transporter ATPase domain-like
Protein: DNA repair protein MutS, the C-terminal domain
Species: Escherichia coli
Species SCOP sunid: 52699

 Set description
Number of entries: 14
SCOP Entries: d1ng9b2 d1w7ab2 d1oh6a2 d1oh6b2 d1oh5a2 d1oh8b2 d1w7aa2 d1oh7b2 d1e3ma2 d1oh7a2 d1e3mb2 d1oh5b2 d1ng9a2 d1oh8a2
Alignment File: 52699.alig
Aligned Sequences: 52699_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 52699_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(49, 53), (92, 110), (136, 142), (189, 199), (211, 226), (239, 243)]
Uniprot Nr [(615, 618), (655, 671), (695, 701), (747, 757), (768, 783), (796, 800)]

 Invariant Regions
Region1
Alignment Nr[(0, 48), (54, 91), (143, 188), (200, 210), (227, 238)]
Uniprot Nr[(567, 614), (619, 654), (702, 746), (758, 767), (784, 795)]
Superposition52699_superp_1.pdb.gz
Rasmol Script52699_superp_1.rsm
View in Jmol
 
Region2
Alignment Nr[(0, 48), (54, 91), (111, 135), (143, 188)]
Uniprot Nr[(567, 614), (619, 654), (672, 694), (702, 746)]
Superposition52699_superp_2.pdb.gz
Rasmol Script52699_superp_2.rsm
View in Jmol