STRuster

 STRuster results: 52620

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: P-loop containing nucleoside triphosphate hydrolases
Superfamily: P-loop containing nucleoside triphosphate hydrolases
Family: G proteins
Protein: CDC42
Species: Human (Homo sapiens)
Species SCOP sunid: 52620

 Set description
Number of entries: 17
SCOP Entries: d1an0b_ d1gzsa_ d1nf3b_ d1a4ra_ d1kz7b_ d1doaa_ d1ki1c_ d2ngra_ d1an0a_ d1nf3a_ d1kz7d_ d1kzgd_ d1ki1a_ d1gzsc_ d1grna_ d1kzgb_ d1a4rb_
Alignment File: 52620.alig
Aligned Sequences: 52620_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 52620_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 8), (35, 72), (138, 142), (185, 199)]
Uniprot Nr [(0, 1), (28, 64), (130, 134), (177, 191)]

 Invariant Regions
Region1
Alignment Nr[(9, 34), (73, 137), (143, 184)]
Uniprot Nr[(2, 27), (65, 129), (135, 176)]
Superposition52620_superp_1.pdb.gz
Rasmol Script52620_superp_1.rsm
View in Jmol