STRuster

 STRuster results: 52564

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: P-loop containing nucleoside triphosphate hydrolases
Superfamily: P-loop containing nucleoside triphosphate hydrolases
Family: Nucleotide and nucleoside kinases
Protein: Thymidylate kinase
Species: Baker's yeast (Saccharomyces cerevisiae)
Species SCOP sunid: 52564

 Set description
Number of entries: 12
SCOP Entries: d3tmkd_ d3tmkg_ d1tmkb_ d3tmkb_ d2tmka_ d1tmka_ d2tmkb_ d3tmke_ d3tmkh_ d3tmkf_ d3tmkc_ d3tmka_
Alignment File: 52564.alig
Aligned Sequences: 52564_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 52564_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 1), (136, 146), (207, 215)]
Uniprot Nr [(1, 2), (137, 147), (208, 216)]

 Invariant Regions
Region1
Alignment Nr[(2, 135), (147, 206)]
Uniprot Nr[(3, 136), (148, 207)]
Superposition52564_superp_1.pdb.gz
Rasmol Script52564_superp_1.rsm
View in Jmol