STRuster

 STRuster results: 52549

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: P-loop containing nucleoside triphosphate hydrolases
Superfamily: P-loop containing nucleoside triphosphate hydrolases
Family: Nucleotide and nucleoside kinases
Protein: CMP kinase
Species: Escherichia coli
Species SCOP sunid: 52549

 Set description
Number of entries: 10
SCOP Entries: d1kdtb_ d1kdpa_ d1ckea_ d1kdob_ d1kdta_ d1kdoa_ d2cmka_ d1kdra_ d1kdpb_ d1kdrb_
Alignment File: 52549.alig
Aligned Sequences: 52549_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 52549_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 0), (66, 76), (153, 155), (182, 184), (221, 224)]
Uniprot Nr [(3, 3), (69, 79), (156, 158), (185, 187), (224, 227)]

 Invariant Regions
Region1
Alignment Nr[(1, 65), (77, 152)]
Uniprot Nr[(4, 68), (80, 155)]
Superposition52549_superp_1.pdb.gz
Rasmol Script52549_superp_1.rsm
View in Jmol
 
Region2
Alignment Nr[(1, 65), (185, 220)]
Uniprot Nr[(4, 68), (188, 223)]
Superposition52549_superp_2.pdb.gz
Rasmol Script52549_superp_2.rsm
View in Jmol
 
Region3
Alignment Nr[(156, 181), (185, 220)]
Uniprot Nr[(159, 184), (188, 223)]
Superposition52549_superp_3.pdb.gz
Rasmol Script52549_superp_3.rsm
View in Jmol