STRuster

 STRuster results: 52543

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: P-loop containing nucleoside triphosphate hydrolases
Superfamily: P-loop containing nucleoside triphosphate hydrolases
Family: Nucleotide and nucleoside kinases
Protein: Guanylate kinase
Species: Baker's yeast (Saccharomyces cerevisiae)
Species SCOP sunid: 52543

 Set description
Number of entries: 3
SCOP Entries: d1ex7a_ d1ex6b_ d1ex6a_
Alignment File: 52543.alig
Aligned Sequences: 52543_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 52543_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(24, 31), (62, 68), (79, 87), (108, 110), (135, 136), (183, 185)]
Uniprot Nr [(25, 32), (63, 69), (80, 88), (109, 111), (136, 137), (184, 186)]

 Invariant Regions
Region1
Alignment Nr[(0, 23), (88, 107), (111, 134), (137, 182)]
Uniprot Nr[(1, 24), (89, 108), (112, 135), (138, 183)]
Superposition52543_superp_1.pdb.gz
Rasmol Script52543_superp_1.rsm
View in Jmol
 
Region2
Alignment Nr[(32, 61), (69, 78)]
Uniprot Nr[(33, 62), (70, 79)]
Superposition52543_superp_2.pdb.gz
Rasmol Script52543_superp_2.rsm
View in Jmol