STRuster

 STRuster results: 52465

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: PreATP-grasp domain
Superfamily: PreATP-grasp domain
Family: Synapsin domain
Protein: Synapsin I
Species: Cow (Bos taurus)
Species SCOP sunid: 52465

 Set description
Number of entries: 4
SCOP Entries: d1auxa1 d1auvb1 d1auva1 d1auxb1
Alignment File: 52465.alig
Aligned Sequences: 52465_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 52465_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(57, 64), (85, 87)]
Uniprot Nr [(166, 173), (193, 195)]

 Invariant Regions
Region1
Alignment Nr[(0, 56), (65, 84), (88, 105)]
Uniprot Nr[(110, 165), (174, 192), (196, 213)]
Superposition52465_superp_1.pdb.gz
Rasmol Script52465_superp_1.rsm
View in Jmol