STRuster

 STRuster results: 52454

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: PreATP-grasp domain
Superfamily: PreATP-grasp domain
Family: D-Alanine ligase N-terminal domain
Protein: D-Ala-D-Ala ligase, N-domain
Species: Escherichia coli, gene ddlB
Species SCOP sunid: 52454

 Set description
Number of entries: 2
SCOP Entries: d1iov_1 d1iow_1
Alignment File: 52454.alig
Aligned Sequences: 52454_alig.fasta

 Hierarchical clustering
Dissimilary matrix: 52454_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 2)]
Uniprot Nr [(0, 2)]

 Invariant Regions
Region1
Alignment Nr[(3, 95)]
Uniprot Nr[(3, 95)]
Superposition52454_superp_1.pdb.gz
Rasmol Script52454_superp_1.rsm
View in Jmol