STRuster

 STRuster results: 52421

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
Superfamily: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
Family: Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain
Protein: Thymidine phosphorylase
Species: Escherichia coli
Species SCOP sunid: 52421

 Set description
Number of entries: 4
SCOP Entries: d1otp_2 d1azya2 d2tpt_2 d1azyb2
Alignment File: 52421.alig
Aligned Sequences: 52421_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 52421_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 2), (42, 43), (84, 100), (114, 115)]
Uniprot Nr [(71, 73), (113, 114), (155, 171), (185, 186)]

 Invariant Regions
Region1
Alignment Nr[(3, 41), (101, 113), (116, 264)]
Uniprot Nr[(74, 112), (172, 184), (187, 335)]
Superposition52421_superp_1.pdb.gz
Rasmol Script52421_superp_1.rsm
View in Jmol