STRuster

 STRuster results: 52102

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: ClpP/crotonase
Superfamily: ClpP/crotonase
Family: Tail specific protease, catalytic domain
Protein: Photosystem II D1 C-terminal processing protease
Species: Algae (Scenedesmus obliquus)
Species SCOP sunid: 52102

 Set description
Number of entries: 4
SCOP Entries: d1fc7a4 d1fc6a4 d1fc9a4 d1fcfa4
Alignment File: 52102.alig
Aligned Sequences: 52102_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 52102_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(0, 1), (56, 57), (72, 80), (334, 336)]
Uniprot Nr [(77, 78), (131, 132), (147, 155), (408, 410)]

 Invariant Regions
Region1
Alignment Nr[(2, 55), (58, 71), (81, 333), (337, 389)]
Uniprot Nr[(79, 131), (133, 146), (156, 407), (411, 463)]
Superposition52102_superp_1.pdb.gz
Rasmol Script52102_superp_1.rsm
View in Jmol