STRuster

 STRuster results: 52064

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
Superfamily: L domain-like
Family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain
Protein: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain
Species: Rat (Rattus norvegicus)
Species SCOP sunid: 52064

 Set description
Number of entries: 3
SCOP Entries: d1dcec3 d1ltxa3 d1dcea3
Alignment File: 52064.alig
Aligned Sequences: 52064_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 52064_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Invariant Regions
Region1
Alignment Nr[(0, 123)]
Uniprot Nr[(444, 567)]
Superposition52064_superp_1.pdb.gz
Rasmol Script52064_superp_1.rsm
View in Jmol