STRuster

 STRuster results: 52004

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: PFL-like glycyl radical enzymes
Superfamily: PFL-like glycyl radical enzymes
Family: R1 subunit of ribonucleotide reductase, C-terminal domain
Protein: R1 subunit of ribonucleotide reductase, C-terminal domain
Species: Escherichia coli
Species SCOP sunid: 52004

 Set description
Number of entries: 22
SCOP Entries: d2r1ra2 d7r1ra2 d5r1rb2 d5r1rc2 d7r1rb2 d1r1rb2 d6r1ra2 d2r1rb2 d6r1rc2 d3r1rc2 d1r1ra2 d4r1rb2 d6r1rb2 d4r1ra2 d2r1rc2 d3r1ra2 d7r1rc2 d1rlr_2 d1r1rc2 d5r1ra2 d3r1rb2 d4r1rc2
Alignment File: 52004.alig
Aligned Sequences: 52004_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 52004_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(42, 44), (71, 72), (99, 105), (513, 524)]
Uniprot Nr [(264, 266), (293, 294), (321, 327), (735, 746)]

 Invariant Regions
Region1
Alignment Nr[(0, 41), (106, 512)]
Uniprot Nr[(222, 263), (328, 734)]
Superposition52004_superp_1.pdb.gz
Rasmol Script52004_superp_1.rsm
View in Jmol