STRuster

 STRuster results: 51888

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: NAD(P)-binding Rossmann-fold domains
Superfamily: NAD(P)-binding Rossmann-fold domains
Family: Aminoacid dehydrogenase-like, C-terminal domain
Protein: Glutamate dehydrogenase
Species: Thermotoga maritima
Species SCOP sunid: 51888

 Set description
Number of entries: 18
SCOP Entries: d2tmgb1 d1b3bd1 d1b26f1 d1b3be1 d1b26a1 d1b3bf1 d1b26d1 d1b3bc1 d2tmge1 d2tmgf1 d1b26b1 d2tmgc1 d1b3ba1 d1b26e1 d1b3bb1 d2tmgd1 d2tmga1 d1b26c1
Alignment File: 51888.alig
Aligned Sequences: 51888_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 51888_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(27, 37), (71, 104), (120, 120)]
Uniprot Nr [(206, 216), (250, 283), (299, 299)]

 Invariant Regions
Region1
Alignment Nr[(0, 26), (38, 70), (105, 119), (121, 233)]
Uniprot Nr[(179, 205), (217, 249), (284, 298), (300, 412)]
Superposition51888_superp_1.pdb.gz
Rasmol Script51888_superp_1.rsm
View in Jmol