STRuster

 STRuster results: 51855

 SCOP 1.71 classification
Class: Alpha and beta proteins (a/b)
Fold: NAD(P)-binding Rossmann-fold domains
Superfamily: NAD(P)-binding Rossmann-fold domains
Family: LDH N-terminal domain-like
Protein: Malate dehydrogenase
Species: Archaeon Haloarcula marismortui
Species SCOP sunid: 51855

 Set description
Number of entries: 12
SCOP Entries: d1d3aa1 d1o6zd1 d1gt2b1 d1o6za1 d1hlpb1 d1o6zc1 d1hlpa1 d2hlpa1 d2hlpb1 d1o6zb1 d1d3ab1 d1gt2a1
Alignment File: 51855.alig
Aligned Sequences: 51855_alig.fasta

 Hierarchical clustering
Dendrogram

Dissimilary matrix: 51855_dissim_matrix.txt

 Atom Distance Standard Deviation Plots
 S matrix: Distance Standard Deviation
distance standard deviation
Higher resolution plot
S matrix

 T matirx: Total Standard Deviation
distance+sus standard deviation
Higher resolution plot
T matrix

 R matrix: Relative Distance Standard Deviation
relative distance standard deviation
Higher resolution plot
R matrix

 Hinges and Invariant Regions (T)
 Hinges
Alignment Nr[(55, 62), (79, 85), (109, 111)]
Uniprot Nr [(57, 64), (81, 87), (111, 113)]

 Invariant Regions
Region1
Alignment Nr[(0, 54), (63, 78), (86, 108), (112, 143)]
Uniprot Nr[(2, 56), (65, 80), (88, 110), (114, 145)]
Superposition51855_superp_1.pdb.gz
Rasmol Script51855_superp_1.rsm
View in Jmol